PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010526650.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family ERF
Protein Properties Length: 308aa    MW: 34489.5 Da    PI: 4.8739
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010526650.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.82e-21126176256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+ge
  XP_010526650.1 126 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAAMAYDQAAYKLRGE 176
                     59******9.**********965...5**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.45E-35125184No hitNo description
SuperFamilySSF541712.03E-23126184IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.0E-32126184IPR001471AP2/ERF domain
PROSITE profilePS5103223.327126183IPR001471AP2/ERF domain
SMARTSM003805.2E-40126189IPR001471AP2/ERF domain
PRINTSPR003672.3E-11127138IPR001471AP2/ERF domain
PfamPF008475.3E-15127176IPR001471AP2/ERF domain
PRINTSPR003672.3E-11149165IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MAAIDMFNSS SNFSDPFREE LMKALEPFMK SASPSPPFSP LSPSFSQLSS YPQPNFPELS  60
YLPNTSFFPS MGFSQTAPLG LNQLTPYQIN QIQNQLNQRH AFVSNLSPKP VPMKNFSSCS  120
LKSQKLYRGV RQRHWGKWVA EIRLPKNRTR LWLGTFDTAE EAAMAYDQAA YKLRGELARL  180
NFPHIRHDEN GLVGSFKPLH ASVDAKLEAI CQGLRKTEEP CSVSDETELI QPKTEQESEL  240
SDKTESGFPR FDEHSVSDES QAGSSSPESG ITFLDFSDSG FDEIGNLGLE KFPSVEIDWE  300
AISKLSES
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-21125183160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010526650.10.0PREDICTED: ethylene-responsive transcription factor ERF060
SwissprotO656651e-128ERF60_ARATH; Ethylene-responsive transcription factor ERF060
TrEMBLA0A0D3A1071e-135A0A0D3A107_BRAOL; Uncharacterized protein
STRINGBra011833.1-P1e-134(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM26802768
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.11e-107ERF family protein